Found 92 results
Chen Q, Rankine A, Peng Y, Aghaarabi E, Lu Z.  2021.  Benchmarking Effectiveness and Efficiency of Deep Learning Models for Semantic Textual Similarity in the Clinical Domain: Validation Study.. JMIR Med Inform. 9(12):e27386.
Peng Y, Tang Y, Lee S, Zhu Y, Summers RM, Lu Z.  2021.  COVID-19-CT-CXR: A Freely Accessible and Weakly Labeled Chest X-Ray and CT Image Collection on COVID-19 From Biomedical Literature. IEEE Transactions on Big Data. 7(1):3-12.
Karabulut MEfruz, Vijay-Shanker K., Peng Y.  2021.  CU-UD: text-mining drug and chemical-proteininteractions with ensembles of BERT-based models. BioCreative VII. :45-48.
Ghahramani GC, Brendel M, Chen Q, Keenan TD, Chen K, Chew EY, Lu Z, Peng Y, Wang F.  2021.  Deep learning survival analysis on the progression to late AMD in the Age-Related Eye Disease Study. Investigative Ophthalmology & Visual Science.
Mathai TSudharshan, Lee S, Elton DC, Shen TC, Peng Y, Lu Z, Summers RM.  2021.  Detection of lymph nodes in T2 MRI using neural network ensembles. Learning in Medical Imaging (MLMI). :682-691.
Paul A, Shen TC, Lee S, Balachandar N, Peng Y, Lu Z, Summers RM.  2021.  Generalized Zero-shot Chest X-ray Diagnosis through Trait-Guided Multi-view Semantic Embedding with Self-training.. IEEE Trans Med Imaging.
Ji Z, Shaikh MAbuzar, Moukheiber D, Srihari SN, Peng Y, Gao M.  2021.  Improving Joint Learning of Chest X-Ray and Radiology Report by Word Region Alignment. International Workshop on Machine Learning in Medical Imaging.
Paul A, Shen TC, Peng Y, Lu Z, Summers RM.  2021.  Learning few-shot chest X-ray diagnosis using images from the published scientific literature. IEEE International Symposium on Biomedical Imaging (ISBI).
Lee HGi, Scholle E, Al'Aref S, Beecy A, Peng Y.  2021.  Leveraging Deep Representations of Radiology Reports in Survival Analysis for Predicting Heart Failure Patient Mortality. NAACL.
Chen Q, Keenan TDL, Allot A, Peng Y, Agrón E, Domalpally A, Klaver CCW, Luttikhuizen DT, Colyer MH, Cukras CA et al..  2021.  Multimodal, multitask, multiattention (M3) deep learning detection of reticular pseudodrusen: Toward automated and accessible classification of age-related macular degeneration.. J Am Med Inform Assoc.
Ghahramani G, Brendel M, Lin M, Chen Q, Keenan T, Chen K, Chew E, Lu Z, Peng Y, Wang F.  2021.  Multi-task deep learning-based survival analysis on the prognosis of late AMD using the longitudinal data in AREDS.. AMIA Annu Symp Proc. 2021:506-515.
Islamaj R, Leaman R, Kim S, Kwon D, Wei C-H, Comeau DC, Peng Y, Cissel D, Coss C, Fisher C et al..  2021.  NLM-Chem, a new resource for chemical entity recognition in PubMed full text literature.. Sci Data. 8(1):91.
Han Y, Chen C, Tewfik AH, Ding Y, Peng Y.  2021.  Pneumonia Detection on Chest X-ray using Radiomic Features and Contrastive Learning. IEEE International Symposium on Biomedical Imaging (ISBI).
Jaiswal A, Tang L, Ghosh M, Rousseau J, Peng Y, Ding Y.  2021.  RadBERT-CL: Factually-Aware Contrastive Learning for Radiology Report Classification. Machine Learning for Health (ML4H). :196-208.
Sun Q, Peng Y, Liu J.  2021.  A reference-free approach for cell type classification with scRNA-seq.. iScience. 24(8):102855.
Jaiswal A, Li T, Zander C, Han Y, Rousseau JF, Peng Y, Ding Y.  2021.  SCALP - Supervised Contrastive Learning for Cardiopulmonary Disease Classification and Localization in Chest X-rays using Patient Metadata. The IEEE International Conference on Data Mining (ICDM).
Han Y, Chen C, Tang L, Lin M, Jaiswal A, Wang S, Tewfik A, Shih G, Ding Y, Peng Y.  2021.  Using Radiomics as Prior Knowledge for Thorax Disease Classification and Localization in Chest X-rays.. AMIA Annu Symp Proc. 2021:546-555.
He X, Zhang R, Alpert J, Zhou S, Adam TJ, Raisa A, Peng Y, Zhang H, Guo Y, Bian J.  2021.  When text simplification is not enough: could a graph-based visualization facilitate consumers' comprehension of dietary supplement information? JAMIA Open. 4(1):ooab026.