Publications

Deng R, Martin G, Wang T, Zhang G, Liu Y, Weng C, Wang Y, Rousseau JF, Peng Y.  2026.  CPGPrompt: translating clinical guidelines into large language model-executable decision support.. J Am Med Inform Assoc.

Fang Y, Zhang G, Chen F, Peng Y, Weng C.  2026.  A critical evaluation of generative query expansion on biomedical literature retrieval.. J Am Med Inform Assoc. 33(6):1121-1133.

Zhou Z, Deng Y, Liu L, Jiang H, Peng Y, Yang X, Zhao Y, Ning H, Allen NB, Wilkins JT et al..  2026.  Deep Neural Network With a Smooth Monotonic Output Layer for Dynamic Risk Prediction.. Stat Med. 45(3-5):e70401.

Wu P, Dong H, Lin Y, Ding Y, Peng Y.  2026.  A Disease-Aware Dual-Stage Framework for Chest X-ray Report Generation.. Proc AAAI Conf Artif Intell. 40(40):33953-33961.

Xu Z, Lin M, Zhou Y, Xu Z, Orlow SJ, Meehan SA, Flamm A, Moshiri AS, Peng Y.  2026.  Establishing dermatopathology encyclopedia DermpathNet with Artificial Intelligence-Based Workflow.. Sci Data. 13(1)

Yang R, Li H, Wong MYu Heng, Ke Y, Li X, Yu K, Liao J, Liew JChong Kai, Nair SVinod, Ong JChiat Ling et al..  2026.  The evolving landscape of large language models and non-large language models in health care.. Npj Health Syst. 3

Flanders AE, Peng Y, Prevedello L, Ball R, Colak E, Menon P, Shih G, Lin H-M, Lakhani P.  2026.  A multi-agent large language model framework to automatically assess performance of a clinical AI Triage tool.. Npj Health Syst. 3

Zhang G, Fang Y, Chen F, Ta C, Hripcsak G, Ryan P, Peng Y, Weng C.  2026.  A neural-symbolic AI agent system for biomedical concept mapping.. NPJ Digit Med. 9(1)

Dong H, Lin Y, Zhou P, Feng XZhong, Legasto AClint, Lin M, Chen H, Yang Y, Shih G, Peng Y.  2026.  OVERVIEW OF THE CXR-LT 2026 CHALLENGE: MULTI-CENTER LONG-TAILED AND ZERO SHOT CHEST X-RAY CLASSIFICATION.. Proc IEEE Int Symp Biomed Imaging. 2026

Wei Y, Lin Y, Flanders A, Shih G, Peng Y.  2026.  Reinforcement learning improves LLM accuracy and reasoning in disease classification from radiology reports.. NPJ Digit Med.

Lin Y, Yang Y, Shih G, Peng Y.  2026.  Rethinking radiology AI benchmarks.. Radiol Adv. 3(3):umag022.

He S, Nie Y, Wang H, Yang S, Wang Y, Cai Z, Chen Z, Xu Y, Wu L, Cheng NShing et al..  2026.  Towards generalizable AI in medicine via Generalist-Specialist Collaboration.. Nat Biomed Eng.

Song Y, Zhang Y, Orengo-Nania S, Wang N, Ma F, Zhang R, Peng Y, Lin M.  2026.  Two-Stage Decoupling Framework for Variable-Length Glaucoma Prognosis.. Learn Longitud Med Images Data (2025). 16184:91-101.