Publications

Teran F, Owyang CG, Wray TC, Hipskind JE, Lessard J, Michel WBédard, Lanthier C, Nazerian P, de Villa E, Nogueira J et al..  2025.  Development and Implementation of a Multicenter Registry for Resuscitation-Focused Transesophageal Echocardiography.. Ann Emerg Med. 85(2):147-162.

Wang Y, Hilsman J, Li C, Morris M, Heider PM, Fu S, Kwak MJi, Wen A, Applegate JR, Wang L et al..  2025.  Development and Validation of Natural Language Processing Algorithms in the ENACT National Electronic Health Record Research Network.. medRxiv.

Wang Y, Hilsman J, Li C, Morris M, Heider PM, Fu S, Kwak MJi, Wen A, Applegate JR, Wang L et al..  2025.  Development and Validation of Natural Language Processing Algorithms in the ENACT National Electronic Health Record Research Network.. medRxiv.

Wang Y, Hilsman J, Li C, Morris M, Heider PM, Fu S, Kwak MJi, Wen A, Applegate JR, Wang L et al..  2025.  Development and Validation of Natural Language Processing Algorithms in the ENACT National Electronic Health Record Research Network.. medRxiv.

Morris JX, Campion TR, Nutheti SLaasya, Peng Y, Raj A, Zabih R, Cole CL.  2025.  DIRI: Adversarial Patient Reidentification with Large Language Models for Evaluating Clinical Text Anonymization.. AMIA Jt Summits Transl Sci Proc. 2025:355-364.

Morris JX, Campion TR, Nutheti SLaasya, Peng Y, Raj A, Zabih R, Cole CL.  2025.  DIRI: Adversarial Patient Reidentification with Large Language Models for Evaluating Clinical Text Anonymization.. AMIA Jt Summits Transl Sci Proc. 2025:355-364.

Idnay B, Xu Z, Adams WG, Adibuzzaman M, Anderson NR, Bahroos N, Bell DS, Bumgardner C, Campion T, Castro M et al..  2025.  Environment scan of generative AI infrastructure for clinical and translational science.. Npj Health Syst. 2(1):4.

Idnay B, Xu Z, Adams WG, Adibuzzaman M, Anderson NR, Bahroos N, Bell DS, Bumgardner C, Campion T, Castro M et al..  2025.  Environment scan of generative AI infrastructure for clinical and translational science.. Npj Health Syst. 2(1):4.

Idnay B, Xu Z, Adams WG, Adibuzzaman M, Anderson NR, Bahroos N, Bell DS, Bumgardner C, Campion T, Castro M et al..  2025.  Environment scan of generative AI infrastructure for clinical and translational science.. Npj Health Syst. 2(1):4.

Idnay B, Xu Z, Adams WG, Adibuzzaman M, Anderson NR, Bahroos N, Bell DS, Bumgardner C, Campion T, Castro M et al..  2025.  Environment scan of generative AI infrastructure for clinical and translational science.. Npj Health Syst. 2(1):4.

Bai Z, Xu Z, Sun C, Zang C, H Bunnell T, Sinfield C, Rutter J, Martinez AThomas, L Bailey C, Weiner M et al..  2025.  Extracting post-acute sequelae of SARS-CoV-2 infection symptoms from clinical notes via hybrid natural language processing.. Npj Health Syst. 2

Bai Z, Xu Z, Sun C, Zang C, H Bunnell T, Sinfield C, Rutter J, Martinez AThomas, L Bailey C, Weiner M et al..  2025.  Extracting post-acute sequelae of SARS-CoV-2 infection symptoms from clinical notes via hybrid natural language processing.. Npj Health Syst. 2

Wang Z, Cao L, Jin Q, Chan J, Wan N, Afzali B, Cho H-J, Choi C-I, Emamverdi M, Gill MK et al..  2025.  A foundation model for human-AI collaboration in medical literature mining.. Nat Commun. 16(1):8361.

Wang Z, Cao L, Jin Q, Chan J, Wan N, Afzali B, Cho H-J, Choi C-I, Emamverdi M, Gill MK et al..  2025.  A foundation model for human-AI collaboration in medical literature mining.. Nat Commun. 16(1):8361.

Wang Z, Cao L, Jin Q, Chan J, Wan N, Afzali B, Cho H-J, Choi C-I, Emamverdi M, Gill MK et al..  2025.  A foundation model for human-AI collaboration in medical literature mining.. Nat Commun. 16(1):8361.

Wang Z, Cao L, Jin Q, Chan J, Wan N, Afzali B, Cho H-J, Choi C-I, Emamverdi M, Gill MK et al..  2025.  A foundation model for human-AI collaboration in medical literature mining.. Nat Commun. 16(1):8361.

Sun C, Teichman K, Zhou Y, Critelli B, Nauheim D, Keir G, Wang X, Zhong J, Flanders AE, Shih G et al..  2025.  Generative Large Language Models Trained for Detecting Errors in Radiology Reports.. Radiology. 315(2):e242575.

Zhang G, Xu Z, Jin Q, Chen F, Fang Y, Liu Y, Rousseau JF, Xu Z, Lu Z, Weng C et al..  2025.  Leveraging long context in retrieval augmented language models for medical question answering.. NPJ Digit Med. 8(1):239.

Chen J, Su L, Li Y, Lin M, Peng Y, Sun C.  2025.  A multimodal approach for few-shot biomedical named entity recognition in low-resource languages.. J Biomed Inform. 161:104754.

Ma H, Xu Z, Chung W, Weng C, Peng Y.  2025.  A Pilot Meta-Research on Evolving Evidence Behind Genetic Variant (Re)Classification.. Stud Health Technol Inform. 329:108-112.

Liang Y, Zhang G, Sun E, Idnay B, Fang Y, Chen F, Ta C, Peng Y, Weng C.  2025.  Scalable scientific interest profiling using large language models.. J Biomed Inform. 172:104949.

Consoli B, Wang H, Wu X, Wang S, Zhao X, Wang Y, Rousseau J, Hartvigsen T, Shen L, Wu H et al..  2025.  SDoH-GPT: using large language models to extract social determinants of health.. J Am Med Inform Assoc.

Consoli B, Wang H, Wu X, Wang S, Zhao X, Wang Y, Rousseau J, Hartvigsen T, Shen L, Wu H et al..  2025.  SDoH-GPT: using large language models to extract social determinants of health.. J Am Med Inform Assoc.

Chen F, Zhang G, Fang Y, Peng Y, Weng C.  2025.  Semi-supervised learning from small annotated data and large unlabeled data for fine-grained Participants, Intervention, Comparison, and Outcomes entity recognition.. J Am Med Inform Assoc. 32(3):555-565.

Wu P, Lin M, Chen Q, Chew EY, Lu Z, Peng Y, Dong H.  2026.  AMD-Mamba: A Phenotype-Aware Multi-modal Framework for Robust AMD Prognosis.. Mach Learn Med Imaging. 16241:150-160.