Publications

Zhang G, Xu Z, Jin Q, Chen F, Fang Y, Liu Y, Rousseau JF, Xu Z, Lu Z, Weng C et al..  2025.  Leveraging long context in retrieval augmented language models for medical question answering.. NPJ Digit Med. 8(1):239.

Lu Z, Peng Y, Cohen T, Ghassemi M, Weng C, Tian S.  2024.  Large language models in biomedicine and health: current research landscape and future directions.. J Am Med Inform Assoc. 31(9):1801-1811.

Zhang G, Jin Q, McInerney DJered, Chen Y, Wang F, Cole CL, Yang Q, Wang Y, Malin BA, Peleg M et al..  2024.  Leveraging generative AI for clinical evidence synthesis needs to ensure trustworthiness.. J Biomed Inform. 153:104640.

Tang L, Peng Y, Wang Y, Ding Y, Durrett G, Rousseau JF.  2023.  Less Likely Brainstorming: Using Language Models to Generate Alternative Hypotheses.. Proc Conf Assoc Comput Linguist Meet. 2023:12532-12555.

Holste G, Wang S, Jiang Z, Shen TC, Shih G, Summers RM, Peng Y, Wang Z.  2022.  Long-Tailed Classification of Thorax Diseases on Chest X-Ray: A New Benchmark Study.. Data Augment Label Imperfections (2022). 13567:22-32.

Mathai TSudharshan, Lee S, Elton DC, Shen TC, Peng Y, Lu Z, Summers RM.  2022.  Lymph node detection in T2 MRI with transformers. SPIE Medical Imaging. :120333B.

Paul A, Shen TC, Peng Y, Lu Z, Summers RM.  2021.  Learning few-shot chest X-ray diagnosis using images from the published scientific literature. IEEE International Symposium on Biomedical Imaging (ISBI).

Lee HGi, Scholle E, Al'Aref S, Beecy A, Peng Y.  2021.  Leveraging Deep Representations of Radiology Reports in Survival Analysis for Predicting Heart Failure Patient Mortality. NAACL.

Allot A, Peng Y, Wei C-H, Lee K, Phan L, Lu Z.  2018.  LitVar: a semantic search engine for linking genomic variant data in PubMed and PMC. Nucleic Acids Res. 46(W1):W530-W536.